Links to Networked Genetics and Molecular Biology Research Resources

Many of these give access to multiple information resources, and will be useful far beyond the major category. You will have to use your "Back" capability or use our URL to return here. (Sites on other continents are marked with an *. Transoceanic communications may proceed slowly, and you may have to try more than once.)

Directory for this page - check related sections

Agencies and Major Access Sites
Genome Projects and Databases
Genomics
Searching and Tools
Societies and Publications
Research Centers
Research Groups
Other Information Resources
  

• National Biotechnology Information Facility
  
• Baylor College of Medicine Human Genome Sequencing Center
  
• Molecular Biology Gateway to the WWW (many links)*
  
• The National Center for Biotechnology Information NCBI
  
• NIH
  
• NSF
  
• National Institute of Standards and Technology NIST
  
• Agricultural Research Service ARS - USDA
  
• NAL:National Agricultural Library
  
• National Academy of Sciences, Institute of Medicine, National Research Council
  
• U. S. Bureau of the Census
  
• United States Patent and Trademark Office
  
• DNA Patent Database
  
• Sequence Retrieval System - European Bioinformatics Institute*
  
• The Evolution and Population Genetics Educational Database EP-GED - UTA
  
• Health Effects and Life Sciences Research Division DOE
  
• Biotech a biotechnology reference tool - U of Texas & Indiana U.
  
• Earth and Environmental Science (including Biology) USGS
  

Genome Projects and Databases

• Entrez Search NCBI Databases
  
• Online Mendelian Inheritance in Man OMIM
  
• Mouse Genome Informatics The Jackson Laboratory
  
• Trans-NIH Mouse Initiative
  
• FlyBase: a Database of the Drosophila Genome
  
• The Drosophila Virtual Library
  
• The Interactive Fly
  
• Berkeley Drosophila Genome Project BDGP
  
• Maize Genome Database: MaizeDB
  
• Arabidopsis Information Resource
  
• Caenorhabditis elegans UT SW Medical Center at Dallas
  
• Rice Genome Research Program RGP* Japan
  
• HOBACGEN Homologous Bacterial Genes Database*
  
• The Dog Genome Project UCB, UO and FHCRC
  
• Horse Genetics UCD
  
• Cattle Genome Mapping Project USDA
  
• Human Genome Mapping Project Resource Centre (MRC, UK)*
  
• Human Genome Program U.S. Dept. of Energy
  
• Human Genome Project Information DOE at ORNL
  
• National Human Genome Research Institute NHGRI (NIH)
  
• The Genome Data Base GDB
  
• Genethon's Gopher Server*
  
• DNA Data Bank of Japan*
  
• Biocatalysis/Biodegradation U. Minnesota.
  
• Brown Trout population genetics research*
  
• Human and great ape mitochondrial DNA (mtDNA)*
  
  • Replaces HvrBase*
• Saccharomyces Genome Database Stanford
  
• EcoCyc and MetaCyc Encyclopedia of E. coli genes and metabolism
  
• The Protein Information Resource PIR - NBRF
  
• National Biomedical Research Foundation NBRF
  
• Munich Information Center for Protein Sequences* MIPS
  
• SWISS-PROT Annotated protein sequence database*
  
  • Mirror in Canada
• Protein Data Bank (3D Macromolecular Structures) RCSB
  
• NCBI dbEST
  
• Prosite - searchable index
  
• HUGO Mutation Database Initiative*
  
• GenomeNet, Kyoto Univ. and Univ. of Tokyo, Japan*
  
• CGSC: E.coli Genetic Stock Center Yale
  
• MONET/MOL National Institute of Genetics Japan*
  
• JGI DOE Joint Genome Institute (Human Chromosomes 5, 16, 19)
  
• Human Genome Sequencing NCBI
  
• Organism-Specific Databases a directory
  

Genomics

• Agricultural Genomes USDA-ARS Center for Bioinformatics and Comparative Genomics, Cornell U.
  
• National Center For Genome Resources
  
• Stanford Genomic Resources
  
• Genome Research Whitehead Institute
  
• Completed Genomes Search and Analysis BMERC - Boston Univ.
  
• Biological sequence analysis Fred Hutchinson Cancer Research Center
  
• Molecular Evolution and Organelle Genomics U. of Montreal
  
• The Institute for Genomic Research TIGR
  
• USDA-ARS Center for Bioinformatics and Comparative Genetics
  
• Genomics: A Global Resource - PhRMA and AIBS
  
• Genome Information Broker for Microbial Genomes NIG Japan*
  
• Molecular Systematics and Evolution of Microorganisms Course The Natural History Museum, London and Instituto Oswaldo Cruz, Rio de Janeiro*
  
• KEGG Kyoto Encyclopedia of Genes and Genomes*
  

Searching and Tools

• BCM Search Launcher - molecular biology-related search & analysis services
  
• BCM Sequence Annotation Server Add/Share Annotations
  
• Database and Search Tools Baylor
  
• PROSITE Database of protein families and domains*
  
• ENZYME Enzyme nomenclature database*
  
• The Genetic Location Database (LDB)Map construction and other Genetic Epidemiology*
  
• Genetree ancestral inference from DNA sequences*
  
• PEDANT: Protein Extraction, Description, and ANalysis Tool*
  
• What Is There (WIT) Metabolic Reconstruction (registration required)
  
• Molecular Biology Tools
  
• Bioinformatics and Biological Computing Weizmann Institute*
• Maximum Likelihood Analysis for Nucleotide, Amino Acid, and Two-State Data (source code for TREE-PUZZLE)*
• StatLib Index CMU - statistical software, datasets, and info
  
• GAMS : Guide to Available Mathematical Software NIST
  
• Optimization Technology Center Argonne National Lab
• North Carolina Supercomputing Center
  
• FASTA comparison programs Univ. of Virginia
  
• "Panning for genes" Univ. of Virginia (see: Retief, J. D., Lynch, K. R., and Pearson, W. R. (1999) Panning for genes - a visual strategy for identifying novel gene orthologs and paralogs. Genome Res. 9:373-382)
  (Demonstrations (PDF documents): GT; GTM; GSTN_old; GSTN_new
  
• COMPARE 4.0 phylogenetic analysis of comparative data
  
• Biology WorkBench sequence database searching and modelling - SDSC
  

Societies and Publications

• The Genetics Society of America
  
• Journal of Biological Chemistry
• American Medical Assoc. Journals
  
• American Physiological Society APStracts
  
• Science Online AAAS
  
• Nature
  
• Nature Biotechnology On-Line
  
• Nature Genetics
  
• Nature Medicine
  
• Nature Structural Biology
  
• The National Library of Medicine (NLM)
  
• The World Wide Web Journal of Biology
  
• AIBS
  
• The Scientist (a life sciences newspaper)
  
• The Dictionary of Cell Biology 3/e* (occasional use restriction)
  
• Primer on Molecular Genetics old - being updated (Department of Energy)
  
  • Adobe Acrobat (pdf) file (for printing) of the above Primer (download)
    
• Bibliography of Genetic Variation in Natural Populations
  
• BIOSCI/bionet Newsgroups and information resources for Biology
  
• Bibliography on computational gene recognition
  
• Backfiles of scholarly journals
  
• Scientific publications - especially classical genetics, history of science, computational biology and genome research
  
• HUM-MOLGEN Human Molecular Biology preprints and other information*
  
• MOLECULAR BIOLOGY AND EVOLUTION MBE
  
• European Society for EVOLUTIONARY BIOLOGY and the Journal of Evolutionary Biology*
  

Research Centers

• Galton Laboratory London*
  
• Dept of Molecular & Cellular Biology Harvard
  
• Washington U. Institute for Biomedical Computing
  
• ASRI Department of Human Genetics
  
• THE SANGER CENTRE Hinxton, Camb.*
  
• Genomic Reagents Resource Cedars-Sinai Medical Center
  
• European Bioinformatics Inst. (EBI) Hinxton, Camb. - the EMBL Outstation*
  
• EBI's database server*
  
• DNA & Protein Analysis Toolkit Rockefeller University
  
• Computational Biology Group ANL
  

Research Groups

• Computational Ecology Yale
  
• Cavalli Lab Human Population Genetics - Stanford Univ.
  
• Gilbert Lab - Bioinformatics Group Harvard
  
• George Church Lab and Lipper Center - Computational Genetics
  
• Bioinformatics Group ANU*
  
• Caltech Genome Research Laboratory)
  
• Behavior, Speciation and Genetics Group St. Andrews*
  

Other Information Resources

• Agricultural Biotechnology USDA
  
• Access Excellence sponsored by Genentech, Inc. Biology Teaching and Learning (high school emphasis)
  
• Not Just Cows: A guide to Network Resources in Agriculture and Related Sciences
  
• AgDB Agriculture Network Information Center (NAL)
  
• Agripedia "encyclopedia of agriculture"
  
• Human Molecular Genetics (HUM-MOLGEN)
  
• Ethics and Genetics Center for Bioethics - U. Penn.
  
• EMBnet European Molecular Biology network - Swiss node*
  
• NetBiochem Welcome Page - Med Biochem AUHS
  
• Ribonuclease P Database - sequences, alignments, secondary structures, other info
  
• The Tree of Life
  
• UC Museum of Paleontology UCMP
  
• National Action Plan on Breast Cancer (NAPBC)
  
• LIFE Natural History - CSU Australia*
  
• Careers in Science and Engineering A Student Planning Guide to Grad School and Beyond
  
• Main Metabolic Pathways*
  
• WebElements Periodic Table*
  
• Calculate characteristics of single stranded nucleic acid Schepartz Lab Biopolymer Calculator
  
• Viruses
  • Virus Databases Australian National University*
  • All the Virology on the WWW Tulane University

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Comments should be sent to Henry Schaffer <hes@ncsu.edu>
Genetics Web display last changed 14 December 2000.