POPULATION SCALE: ACT haplotypes
Haplotype	Frequency	Strain
1	277	LMK-211
		F5-163-L3
		F5-134-2-S4
		F5-129-L2
		F5-240-L4
		F5-210-L4
		F5-228-2-L4
		F5-205-S3
		F5-164-L2
		F5-219-S1
		F5-206-S2
		F5-211-S1
		F5-148-L1
		F5-178-L1
		F5-137-L3
		F5-169-S2
		F5-134-1-L2
		F5-206-S3
		F5-219-L2
		F5-238-S1
		F5-213-L1
		F5-245-S1
		F5-142-L1
		F5-146-S1
		F5-147-S2
		F5-169-S1
		F5-141-L3
		F5-145-L3
		F5-154-S2
		F5-223-S2
		F5-134-1-L1
		F5-213-S1
		F5-199-L1
		F5-141-L2
		F5-156-S1
		F5-177-L3
		F5-207-L2
		F5-216-L3
		F5-223-L2
		F5-240-1-S3
		F5-240-4-L1
		F1-31-L2
		F1-123-L2
		F1-100-L2
		F2-59-L2
		Nor-3-1
		Lou-4-2
		Lou-4-3
		Lou-3-3
		Lou-3-2
		Lou-2-3
		Lou-2-2
		D-10
		D-9
		D-8
		D-7
		D-6
		D-5
		D-4
		D-3
		D-2
		D-1
		C-10
		C-9
		C-8
		C-7
		C-6
		C-5
		C-4
		C-3
		C-2
		C-1
		B-10
		B-9
		B-8
		B-7
		B-6
		B-5
		B-4
		B-3
		B-2
		B-1
		A-1
		Nor-6-3
		Nor-6-2
		Nor-6-1
		Nor-4-3
		Nor-4-2
		Nor-4-1
		Nor-3-3
		Nor-3-2
		Nor-2-3
		Nor-2-2
		Nor-2-1
		Nor-1-3
		Nor-1-2
		Nor-1-1
		TK
		T-18
		T-17
		T-16
		T-12
		T-11
		T-10
		T-7
		T-6
		T-4
		T-3
		T-2
		GNV-4
		GNV-3
		GNV-1
		MLN-5
		MLN-3
		MLN-1
		TMO-5
		TMO-3
		TMO-1
		MRV-4
		MRV-2
		MRV-1
		REX-4
		REX-2
		REX-1
		LES-3
		LES-2
		LES-1
		LGN-4
		LGN-3
		LGN-1
		JAK-5
		JAK-4
		JAK-1
		PHL-2
		PHL-1
		CLV-5
		CLV-2
		CLV-1
		TMC-4
		TMC-2
		TMC-1
		PIP-4
		PIP-2
		PIP-1
		MUL
		CS
		BLA
		SC-1
		Lou-6-1
		Lou-5-5
		Lou-5-4
		Lou-5-3
		Lou-5-2
		Lou-5-1
		Lou-4-5
		Lou-4-4
		Lou-4-1
		Lou-3-5
		Lou-3-4
		Lou-3-1
		Lou-2-5
		Lou-2-4
		Lou-2-1
		Lou-1-1
		865
		861
		860
		858
		857
		856
		855
		854
		853
		852
		851
		850
		849
		848
		847
		846
		845
		844
		843
		842
		841
		840
		839
		838
		837
		836
		835
		834
		833
		832
		831
		830
		829
		828
		827
		826
		825
		824
		823
		822
		821
		820
		819
		818
		817
		816
		815
		814
		813
		812
		811
		810
		809
		808
		807
		806
		805
		804
		803
		802
		801
		800
		799
		798
		797
		796
		795
		729
		728
		727
		724
		689
		680
		Ss-83
		Ss-43
		Ss-70
		Ss-2
		Ss-71
		Ss-9
		Ss-72
		Ss-45
		Ss-84
		Ss-61
		Ss-51
		Ss-18
		Ss-13
		Ss-19
		Ss-38
		Ss-34
		Ss-49
		Ss-57
		Ss-4
		Ss-21
		Ss-41
		Ss-12
		Ss-1
		Ss-89
		Ss-79
		Ss-68
		Ss-10
		Ss-47
		Ss-30
		Ss-77
		Ss-54
		Ss-36
		Ss-64
		Ss-88
		Ss-87
		Ss-81
		Ss-80
		Ss-82
		Ss-6
		Ss-62
2	64	W1-A1-1
		IC-169
		IC-170
		IC-171
		IC-172
		IC-174
		IC-175
		IC-178
		IC-179
		IC-180
		IC-186
		IC-189
		IC-190
		IC-192
		IC-193
		IC-194
		IC-212
		IC-213
		IC-215
		IC-236
		IC-238
		IC-239
		IC-251
		IC-255
		IC-258
		IC-259
		IC-260
		IC-264
		IC-271
		IC-273
		IC-276
		IC-277
		IC-278
		IC-284
		IC-286
		IC-288
		IC-327
		IC-328
		IC-329
		IC-341
		IC-347
		IC-348
		S1-A3-1
		S1-A3-2
		S1-A5-2
		S3-A4-1
		S3-A4-2
		S3-A5-2
		S6-A4-1
		S6-A4-2
		S6-A2-2
		S6-A2-5
		W1-A3-1
		W1-A3-3
		W1-A5-1
		W1-A5-4
		W2-A3-4
		W2-A3-5
		W2-A4-4
		W2-A4-5
		W3-A1-3
		W3-A1-5
		W3-A3-2
		W3-A3-5